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Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Us...
Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide forma...
Efficiently add Malli schemas to API endpoints in the Metabase codebase with proper patterns, validation timing, and error handling
ISO 13485 Quality Management System specialist for medical device companies. Provides QMS implementation, maintenance, process optimization, and compliance expertise. Use for QMS design, documentation control, management review, internal auditing, co...
Git workflow management including branch validation, commit conventions, PR preparation, and repository health checks.
Git best practices for commits, branches, pull requests, and collaboration workflows following Conventional Commits and GitFlow patterns
Parse specs to extract IDs, titles, and traceability metadata (repo, path, hash).
Manages memory, SSOT files, and Plans.md operations. Use when user mentions メモリ, memory, SSOT, decisions.md, patterns.md, マージ, merge, Plans.md, 移行, migrate. Do NOT load for: 実装作業, レビュー, 一時的なメモ, セッション中の作業記録.
Loop 3 of the Three-Loop Integrated Development System. CI/CD automation with intelligent failure recovery, root cause analysis, and comprehensive quality validation. Receives implementation from Loop 2, feeds failure patterns back to Loop 1. Achieve...
Generic MCP (Model Context Protocol) server development patterns. Provides reusable architecture and best practices for building MCP servers that expose any domain-specific operations as tools for AI agents. Framework-agnostic implementation supporti...
Code-first automated deep threat modeling with comprehensive security chain analysis.
Git workflow conventions for Video.js 10. Commit messages, PR descriptions, branch naming, and scope inference. Triggers: "commit", "push", "create PR", "conventional commit", "branch name", "open pull request".
Master Bash Automated Testing System (Bats) for comprehensive shell script testing. Use when writing tests for shell scripts, CI/CD pipelines, or requiring test-driven development of shell utilities.
Presentation creation, editing, and analysis. When Claude needs to work with presentations (.pptx files) for: (1) Creating new presentations, (2) Modifying or editing content, (3) Working with layouts, (4) Adding comments or speaker notes, or any oth...
This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use this skill for probabilistic modeling, batch corre...
Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, executing computat...
Automated coordination, formatting, and learning from Claude Code operations using intelligent hooks with MCP integration. Includes pre/post task hooks, session management, Git integration, memory coordination, and neural pattern training for enhance...
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